Bioinformatics downloads

Bioinformatics Tools on Mozilla based browsers

...Cytoscape is an open source bioinformatics software platform for...visualizing molecular interaction networks and biological pathways and integrating these networks with annotations...gene expression profiles and other state data...

...and excellent graphical viewing and output options...

...is an integrated suite of bioinformatics tools for the design of long oligonucleotide for micro...The user interface emphasizes useability and is aimed at assisting researchers for a painless...An Online Version allows to design and order oligos directly from internet...

...BioSeqAnalyzer is a bioinformatics software tool for analyzing DNA and protein sequences...All functions can be performed on both DNA and protein sequences...

Simphile, the first pattern recognition software available from Geneffects, derives its name from "the love of similarities." The pattern detection methods used in Simphile have been used in a diverse array of applications ranging from ...

Cn3D is a helper application for your web browser that allows you to view 3-dimensional structures from NCBI`s Entrez retrieval service. Cn3D runs on Windows, Macintosh, and Unix. Cn3D simultaneously displays structure, ...

...The increasing amount of genome sequence data is the basis for understanding life as a molecular system and for developing medical...order systemic behaviors of the cell and the organism from genomic and molecular information...and associated bioinformatics technologies are being developed both for basic research and practical applications...

...alone software tool developed by the NCBI for submitting and updating entries to the GenBank...It is capable of handling simple submissions that contain a single short mRNA sequence...or phylogenetic and population studies...

...storage and retrieval of annotation such as kinetic and other numerical data in relational databases...and links graphical objects to external databases and web resources to show all available information on demand...

This freeware program visualizes pathways (KEGG, BioCarta, GenMAPP, ...). The user has the possibility to display any kind of quantitative data from gene and protein experiments directly within the pathways (colours represent the value). The ...

...Graph visualization is a way of representing structural information as diagrams of abstract graphs and networks...The Graphviz layout programs take descriptions of graphs in a simple text language...

...Phylococo automatically selects the best substitution model of DNA evolution for the dataset of sequences to be analyzed and display after a short time the best so far phylogeny found...s algorithm and Random Search for unconstrained non...

BioPerl provides software modules for many of the typical tasks of bioinformatics programming. These include: <ul style="line-height: 1.5em; list-style-type: square; margin-top: 0.3em; margin-right: 0px; margin-bottom: 0.5em; margin-left: ...

...is an integrated and extendable software platform for the organization and analysis of biological data that runs on all major operating systems...leading DNA and protein analysis tools into a single package that is both ultra...organize and analyze genomic and protein information of any size via a single powerful desktop program that provides publication...

...R is a language and environment for statistical computing and graphics...It is a GNU project which is similar to the S language and environment which was developed at Bell Laboratories...including mathematical symbols and formulae where needed...

...as VMD can read standard Protein Data Bank...VMD provides a wide variety of methods for rendering and coloring a molecule...VMD can be used to animate and analyze the trajectory of a molecular dynamics...

...but there are also quite a few features that make it stand out from the competition...both single and double precision...and last but certainly not least we have written Altivec assembly loops both for Linux and Mac OS X...

...nucleic acids and small molecules...RasMol runs on wide range of architectures and operating systems including Microsoft Windows...The X Windows version of RasMol provides optional support for a hardware dials box and accelerated shared memory communication...