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MarvinSketch 6.2.1

MarvinSketch is an advanced chemical editor for drawing chemical structures, queries and reactions. It has a rich (and growing) list of editing features, is chemically aware and is able to call ChemAxon’s structure based calculation plugins for structures on the canvas. Rich editing:


  • wide range of file types supported: MOL, MOL2, SDF, RXN, RDF (V2000/V3000), SMILES, SMARTS/SMIRKS (recursive), MRV, InChi, CML, PDB etc

  • Copy and paste between different editors

  • Abbreviated groups

  • Pre-loaded structure templates and “My Templates”

  • 3D editing

  • 3D geometry and conformer generation

  • 2D cleaning and conformer generation

  • Advanced query features (generic atoms and bonds, atom lists/not lists, query properties, pseudo atoms, multiple groups, Link nodes, etc)

  • Creating and editing molecule sets (without a database)

  • Multipage documents and printing support

  • Drawing and formatting shapes, arrows and text boxes

  • Structure annotation

  • User definable customisable styles (colours, structure representations, etc)


Chemically aware

  • Structure based calculations can be called directly from MarvinSketch. For a complete listing of functions please see the Calculator Plugins section

  • Error checking (valence and reaction error checking)

  • Structure query design (R-logic, SMARTS properties, etc)

  • Isotopes, charges radicals, lone pairs and aliases are supported

  • Manual and automapping for reaction drawing

  • Advanced stereochemistry functions (E/Z double bonds, R/S chirality, ABS/OR/AND enhanced stereo, etc)


Cross platform delivery

  • Marvin can run on all major operating systems, it is available in the following distributions:

    • Java Applets can easily be implemented into Java enabled web pages without the need for the user to install software or plugins

    • Java Beans can be directly installed to give standalone desktop applications and can also be used to integrate Marvin into Java based applications

    • Java Web Start enables web delivery of end user applications

    • .NET package makes it available to integrate Marvin into .NET applications




User's rating:

  • Currently 2.85/5
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| Web Programming | Viewer | Substructure | Sketcher | Similarity | Searching | Reaction | Odbc | Molecule | Marvin | Jdbc | Jchem | Javabean | Drawing | Database | Clustering | Client-server | Chemistry | Chemical | Chemaxon | Applet | Activex |

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Predicted future versions and notices:

The doDownload.com constantly monitors the update of all programs, including information from the MarvinSketch 6.2.2 changelog file, however sometimes it can happen that data are not complete or are outdated.We assume that author continue's to develop 6.3.0 version with further advanced features, and soon you will be informed. Equally important 7.0.0 upgrades of the program we will continue to monitor. Full MarvinSketch description has been compared with the overall software database and our algorithm has found the following applications (are showed below).