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UGENE 1.12.0

Unipro UGENE is a multiplatform open-source software with the main goal of assisting molecular biologists without much expertise in bioinformatics to manage, analyze and visualize their data. UGENE integrates widely used bioinformatics tools within a common user interface. The toolkit supports multiple biological data formats and allows the retrieval of data from remote data sources. It provides visualization modules for biological objects such as annotated genome sequences, Next Generation Sequencing (NGS) assembly data, multiple sequence alignments, phylogenetic trees and 3D structures. Most of the integrated algorithms are tuned for maximum performance by the usage of multithreading and special processor instructions. UGENE includes a visual environment for creating reusable workflows that can be launched on local resources or in a High Performance Computing (HPC) environment. UGENE is written in C++ using the Qt framework. The built-in plugin system and structured UGENE API make it possible to extend the toolkit with new functionality.

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Predicted future versions and notices:

The constantly monitors the update of all programs, including information from the UGENE 1.12.1 changelog file, however sometimes it can happen that data are not complete or are outdated.We assume that author continue's to develop 1.13.0 version with further advanced features, and soon you will be informed. Equally important 2.0.0 upgrades of the program we will continue to monitor. Full UGENE description has been compared with the overall software database and our algorithm has found the following applications (are showed below).